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Resource Consuption

Manage jobs Monitoring

The consuption can be monitored by a user by the report command.The command shows to two period current month + full consuntpion for each associated QOS. Users with more than one QOS will show separetely [root@cirrus08 ~]$ report --user fabiananeves ...

INCD-Lisbon (cirrus.a.incd.pt)

Compute Node Specs and Information

The list of server class types available to general users in the Cirrus HPC/HTC clusters. INCD-Lisbon login machine: cirrus.a.incd.pt Rocky Linux 8 Type CPU Memory/node #cores/node #servers infiniband queue target users A5 AMD EPYC 7643 5...

How to selected a GPU

Manage jobs GPU user guide

Select any GPU On this example we choose one GPU with at least 8192 MB memory. #!/bin/bash #SBATCH --partition=gpu #SBATCH --gres=gpu #SBATCH --mem=8192MB COMMON=/usr/local/cuda/samples/common SAMPLE=/usr/local/cuda/samples/5_Simulations/nbody ...

Use of user QOS for CPU jobs

Manage jobs Manage slurm jobs

In order to use QOS you will to have an assigned user QOS. In the following example the user will submit a job to the fct partition using an specific created cpca097822021. #!/bin/bash #SBATCH --job-name=prod01 #SBATCH --time=0:10:0 #SBATCH --partition=f...

Quality of Service (QOS)

Manage jobs

Quality of Service (QoS) is used to limite the characteristics that a job can have. Default QOS per partition For every partition (fct, gpu, etc), there is a Quality of Service with different defined parameters like MaxJobs, MaxSubmitJobs. This parameters ac...

INCD basic level

HPC tutorials

You can find the INCD HPC training basic level here

2023

Scientific Publications

International articles with referee Gonçalves, M., Bernardo, C., Bernardino, M., & Soares, C. G. (2022). Climate change impacts on the wave energy in the Azores Islands. Trends in Renewable Energies Offshore, 43-51. CAMPOS, S., RODRIGO, A.P., MOUTINHO C...

2023

Usage Metrics Supported Projects

FCT 2022-2024 (PTDC/BIA-EVL/4345/2021) HYBRIDOMICS: Can hybridization fuel adaptation and species response to environmental change? Genomics and proteomics of endemic Iberian freshwater fish. Human Fronstier Science Program 2020-2024 (RGY0081/2020) Chanc...

2023

Usage Metrics Supported Institutions

2024

Scientific Publications

International articles with referee Nevado B, Atchison GW, Bridges EL, Orzell S, Filatov D, Hughes CE. Pleistocene diversification of unifoliolate-leaved Lupinus (Leguminosae: Paplionoideae) in Florida. Molecular Ecology (accepted). Andrade, R., Laranjeiro,...