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2022

Usage Metrics Supported Projects

Chance or curse? The consequences of hybridization in a changing world" Human Frontier Science...

Updated 1 year ago by João Pina

2021

Usage Metrics Supported Projects

New FCT and international funded projects supported by INCD in 2021. PTDC/BIA-EVL/1100/2020 "...

Updated 1 year ago by João Pina

2020

Usage Metrics Supported Projects

New FCT and international funded projects supported by INCD in 2020. FA_05_2017_007 "The MARV...

Updated 1 year ago by João Pina

2019

Usage Metrics Supported Projects

New FCT and international funded projects supported by INCD in 2019. UID/BIA/00329/2013 "CENTRE...

Updated 1 year ago by João Pina

2018

Usage Metrics Supported Projects

New FCT and international funded projects supported by INCD in 2018. POCI-01-0145-FEDER-007679 ...

Updated 1 year ago by João Pina

2017

Usage Metrics Supported Projects

New FCT and international funded projects supported by INCD in 2017. P2020-PTDC/BIM-MED/0075/20...

Updated 1 year ago by Jorge Gomes

Jobs information

Manage jobs Manage slurm jobs

List all current jobs for a user: squeue -u <username> List all running jobs for a user: ...

Updated 1 year ago by João Pina

Use of user QOS for CPU jobs

Manage jobs Manage slurm jobs

In order to use QOS you will to have an assigned user QOS. In the following example the user will...

Updated 1 year ago by João Pina

INCD basic level

HPC tutorials

You can find the INCD HPC training basic level here

Updated 1 year ago by João Pina

Quality of Service (QOS)

Manage jobs

Quality of Service (QoS) is used to limite the characteristics that a job can have. Default QOS ...

Updated 1 year ago by João Pina

Use QOS to run GPU jobs

Manage jobs GPU user guide

This page it's dedicate to users who want to run GPU's and have a QOS. GPU JOB submission usin...

Updated 1 year ago by João Pina

My first slurm job

Manage jobs Manage slurm jobs

Examples Submit a simple MPI job On this example we run a small MPI application doing the fo...

Updated 1 year ago by João Pina

How to selected a GPU

Manage jobs GPU user guide

Select any GPU On this example we choose one GPU with at least 8192 MB memory. #!/bin/bash ...

Updated 1 year ago by João Pina

Login servers

How to access Login machines

INCD-Lisbon HPC and HTC cluster (Cirrus-A) Access to the INCD advanced computing facilities in ...

Updated 1 year ago by João Pina

How to connect to the HPC and HTC clusters

How to access Public access

public login services Access to the INCD clusters is only available to registered users. To us...

Updated 1 year ago by João Pina

Job pipeline using slurm dependencies

Manage jobs Manage slurm jobs

Some times we need to launch a list of jobs that execute in sequence, one after another. In thos...

Updated 1 year ago by João Paulo Martins

Queues information

Manage jobs

List of Queues INCD-Lisbon cluster (cirrus.a.incd.pt) Name Jobs max elapsed time access Me...

Updated 1 year ago by João Pina

How to run parallel job's with srun

Manage jobs Manage slurm jobs

srun : Used to submit/initiate job or job step Typically, srun is invoked from a SLURM job scr...

Updated 1 year ago by João Pina

Show jobs information in queue

Manage jobs Manage slurm jobs

squeue: view information about jobs located in the Slurm scheduling queue. gqueue: squeue alias ...

Updated 1 year ago by João Pina

stop or cancel jobs

Manage jobs Manage slurm jobs

scancel : used to signal jobs or job steps that are under the control of Slurm The command scan...

Updated 1 year ago by João Pina