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Data Structure

EGI Repositories Requirements

NEW implementation name : Software name version : version of the software name contact : c...

Updated 2 years ago by Carlos A. Manuel

Architecture

EGI Repositories

Updated 2 years ago by João Pina

AlphaFold

Software

Introduction Environment Data Base Location run_udocker.py How to Run Example on Par...

Updated 2 years ago by João Paulo Martins

Cloud Tutorials

Cloud Service

Openstack Tutorials An Openstack Horizon/Dashboard tutorial can be found in these slides The O...

Updated 2 years ago by Mário David

Interactive Sessions

Manage jobs Manage slurm jobs

Slurm allow interactive sessions into the workernodes, using ssh, but within a valid job allocati...

Updated 3 years ago by João Paulo Martins

UDocker Containers

Manage jobs

Availability of udocker containers directly on CVMFS read-only filesystem in order to speedup the...

Updated 3 years ago by João Paulo Martins

How to transfer files between INCD and a local machine

Filesystem User Guide

NOTE Please note that INCD Lustre storage is not designed for small files. Attempting to store ...

Updated 3 years ago by João Paulo Martins

Slurm

Manage jobs Manage slurm jobs

Slurm's architecture Slurm is made of a slurmd daemon running on each compute node and a central...

Updated 3 years ago by Joao Machado

udocker

Containers Tutorials

Seminar Lightweight Virtualization, Seminar at IFT, Madrid, Spain materials UIMP School Inte...

Updated 3 years ago by Jorge Gomes

Introduction

Infrastructures

Introductory materials to digital infrastructures and e-infrastrctures. "e-infrastructures an...

Updated 3 years ago by Jorge Gomes

Tools

Software Lifecycle

"EOSC-Synergy Jenkins Pipeline Library demonstration @ EGI conference 2020" Video: demo ...

Updated 3 years ago by Jorge Gomes

WorSiCa

Thematic Services Tutorials

Tutorials related to the WorSiCa thematic service "Integration of WORSICA's thematic service i...

Updated 3 years ago by Jorge Gomes

GBIF

Thematic Services Tutorials

Tutorials related to the GBIF thematic service "Global Biodiversity Information Facility (GBIF...

Updated 3 years ago by Jorge Gomes

OPENCoastS

Thematic Services Tutorials

Tutorials related to the OPENCoastS thematic service "2nd OPENCoastS e-Tutorial: build your f...

Updated 3 years ago by Jorge Gomes

Principles

Software Lifecycle

"Software Development in modern days: DevOps methodology" Presentation: slides

Updated 3 years ago by Jorge Gomes

Workflow using git

Software

Install git on your machine: See Git installation guide. Create and setup your gitlab account: ...

Updated 3 years ago by Marta Castro

Conda

Software User Software Installation

Another example of conda environment setup. Login on the submit node Login on the cluster submi...

Updated 3 years ago by João Pina

Intel MKL

Software

Intel Math Kernel Library (Intel MKL) is a library of optimized math routines for science, engine...

Updated 3 years ago by Miguel Viana

How to check resource accounting

Cloud Service

In the Openstack dashboard, select "Overview" on the left panel: Scroll down to see the "Usage...

Updated 3 years ago by Mário David

Using SSH tunnels

How to access Using ssh keys

In some cases you may need to access remote hosts that have private IP addresses or are protected...

Updated 3 years ago by Jorge Gomes