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Install by your own: See IBERGRID 2019 Tuturial, check also the general udocker tuturials page Use the already available installation: [user@pauli02 ~]$ module avail ------- /cvmfs/sw.el7/modules/soft ---------- gcc-5.5 matlab/R2018a ...

The INCD-Lisbon facility provide a few GPU, check the Comput Node Specs page. Login on the submit node Login on the cluster submition node, check the How to Access page for more information: $ ssh -l <username> cirrus8.a.incd.pt [username@cirrus01 ~]...

Another example of conda environment setup. Login on the submit node Login on the cluster submission node, check the page How to Access for more information: $ ssh -l <username> cirrus.ncg.ingrid.pt [username@cirrus ~]$ _ Prepare a conda virtual e...

This example will show how to install Octave on the hipotetical user username home directory HOME/soft/octave/5.1.0. The example will use the interactive host to install the software but if you can also write a script and submit a job as long the command line ...

Example of environment configuration for Octave application installed on the example Example of a User application Installation page. Login on the submit node Login on the cluster submition node, check the page How to Access for more information: $ ssh -l &...

Slurm allow interactive sessions into the workernodes, using ssh, but within a valid job allocation, normal ssh are disabled. The interactive session can be created on the scope of normal partitions but those jobs will have the same priority as a regular job. ...

Let's run the gravitational N-body simulation found on the CUDA toolkit samples on a GPU. This example is suited for a standard INCD user elegible to use the hpc and gpu partitions. The fct partition and included resources is meant for users with a FCT gran...

Availability of udocker containers directly on CVMFS read-only filesystem in order to speedup their use and improve reproducibility, reliability and avoid interferences between calls, we will try to optimize compilations when ever possible. This containers ca...

Some times we need to launch a list of jobs that execute in sequence, one after another. In those cases we will use the --depency sbatch option, check the manual page for more details, we will only present a simple example. Simple example Suppose we need to...

Introduction Environment Data Base Location run_udocker.py How to Run Example on Partition "gpu" Example on Partition "fct" Example on Partition "hpc" sbatch Options Benchmarks References 1. Introduction The INCD team prepared a local...