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There are lots of litte tweaks we need in order to prepate the environment for running specific software. We will try to describe the ones we use more regularly so it is easier for the users to work with them. mvapich Version 2.3.3 compiled wiht Intel 2020 ...

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A non exaustive list of security recommendations These recommendations target speacially user and administrators of cloud computing resources (VMs), as well as interaction through the Openstack dashboard and CLI. default security groups, leave only ssh (...

Slurm allow interactive sessions into the workernodes, using ssh, but within a valid job allocation, normal ssh are disabled. The interactive session can be created on the scope of normal partitions but those jobs will have the same priority as a regular job. ...

With this tutorial you will be able to submit a job that uses TensorFlow to the batch cluster. The following steps allow the user to execute a Python script that uses TensorFlow and other Python libraries. Copy the project folder to the cluster [user@fedora ~]...

How to use allocated resources User Access User access must be done using an ssh client, for that you need and ssh key created on your local machine, more on that in this link, if you need help accessing the machine or creating your ssh key, please contact us ...

Let's run the gravitational N-body simulation found on the CUDA toolkit samples on a GPU. This example is suited for a standard Cirrus user elegible to use the hpc and gpu partitions. The fct partition and included resources is meant for users with a FCT gran...

In some cases you may need to access remote hosts that have private IP addresses or are protected behind a firewall. These hosts might be only accessible through an intermediate login host. The SSH tunnels (SSH port forwarding) facilitate access to multiple ho...

In most cases you will not need to add your own SSH public key to other CNCA remote hosts as there are other processes to do so, namelly: To get access to the CNCA login hosts you will be required to send your SSH public key to the CNCA administrators that wi...

In the Openstack dashboard, select "Overview" on the left panel: Scroll down to see the "Usage Summary" and select the initial date, for example January 1st 2021, and end date (the default is the current day): After you click "submit" you will see the su...

Intel Math Kernel Library (Intel MKL) is a library of optimized math routines for science, engineering, and financial applications. Core math functions include BLAS, LAPACK, ScaLAPACK, sparse solvers, fast Fourier transforms, and vector math. The routines in M...

Install git on your machine: See Git installation guide. Create and setup your gitlab account: To create a gitlab acount see Gitlab Sign Up. In the settings tab add your SSH key to your gitlab account. If you don't have a ssh key see Learn how to create a SSH ...

Internationl Paper with refere Nogueira PJ, de Araújo Nobre M, Nicola PJ, Furtado C, Vaz Carneiro A. Excess Mortality Estimation During the COVID-19 Pandemic: Preliminary Data from Portugal. Acta Med Port [Internet]. 2020 Jun. 1 [cited 2023 Jan. 23];33(6):...

Journal Paper with direct contribution de Almeida, Duarte Sampaio Belchior. Urban Tourism Crowding Dynamics: Carrying Capacity and Digital Twinning. Diss. ISCTE-Instituto Universitario de Lisboa (Portugal), 2021. https://www.proquest.com/openview/e302b10227e...

New FCT and international funded projects supported by INCD in 2020. FA_05_2017_007 "The MARVEN Project – The Portuguese biotechnological database for marine animal venoms and toxins" Funding agency: Fundo Azul, Portugal PTDC/BTA-BTA/28650/2017 Worm...

New FCT and international funded projects supported by INCD in 2021. PTDC/BIA-EVL/1100/2020 "Harnessing comparative genomics to understand the role of horizontal acquired genes in the evolution of yeast metabolism" POCI-01-0247-FEDER-039890 GIIP - Ge...

"Software Development in modern days: DevOps methodology" <BR> Presentation: slides