Software List
Software available at the INCD Cirrus HPC and HTC clusters.
INCD-Lisbon HPC and HTC cluster (Cirrus-A)
-------------------------- /cvmfs/sw.el7/modules/LIP ---------------------------
atlasSetup geant/4.10.02.p01 pythia/8.2.15
clhep/2.2.0.8 geant/4.10.03 pythia/8.2.35
clhep/2.3.1.1 geant/4.10.05.p01 pythia/8.2.40
clhep/2.3.2.2 geant/4.10.06 root/5.34.36
clhep/2.3.4.3 geant/4.10.06.p01 root/6.04.02
clhep/2.4.1.3 hepmc/2.6.9 root/6.08.00
delphes/3.4.1 heptoptagger/2.0 root/6.10.02
delphes/3.4.2pre10 lhapdf/6.1.6 root/6.12.06
delphes/3.4.2pre15 lhapdf/6.2.3 root/6.14.06
fastjet/3.3.0 madgraph/2.6.0 root/6.16.00
fluka/2011.2x.7 madgraph/2.6.1 root/6.18.04
gcc74/clhep/2.4.1.3 pythia/6.4.26 topas/3.3.beta1
gcc74/geant/4.10.05.p01 pythia/6.4.28 xroot/4.3.0
-------------------------- /cvmfs/sw.el7/modules/soft --------------------------
aster-13.1.0 hdf5-1.8.16
blat-36.2 homer-4.8
boost-1.55 intel/2019
bowtie2-2.3.0 intel/2019.mkl
clang/7.0.0 intel/2019.mpi
clang/ngspice/30 intel/openmpi/4.0.3
clang/openmpi/4.0.1-test intel/swan/41.31
cmake/3.11.2 kallisto-0.43.0
cmake/3.5.2 macs-1.4.2
conn-R2018b matlab/R2018a
cuda matlab/R2018b
cuda-10.1 matlab/R2019b
cuda-10.2 mpich-3.2
cuda-8.0 mvapich2-1.8
cuda-9.0 netcdf/4.6.1
DATK netcdf2/4.6.1
fastqc-0.11.5 netcdf-fortran/4.4.4
fftw/3.3.4 ngspice/30
fftw/3.3.5 openmpi/2.1.0
gcc-4.8 openmpi-1.10.2
gcc55/openmpi/4.0.1 parallel/20180622
gcc-5.5 plumed-2.2.1
gcc63/mpich-3.2 python/3.7.2
gcc63/netcdf/4.6.1 python-2.7.11
gcc63/netcdf-fortran/4.4.4 python-3.5.1
gcc63/ngspice/30 python-3.5.4
gcc63/openmpi/2.1.0 r-3.2.5
gcc63/openmpi-1.10.2 r-3.5.2
gcc63/r-3.4.2 rt
gcc63/schism/5.4.0 sbcl-1.3.4
gcc63/scipion/2.0_2019-04-23 schism/5.4.0
gcc-6.3 sicer-1.1
gcc-7.3 star-2.5.2b
gcc74/gromacs/2019.4 trimmomatic-0.33
gcc74/openmpi/4.0.1 udocker/1.1.3
gcc74/plumed/2.5.3 weblogo-2.8.2
gcc-7.4 wine/4.2
gromacs-4.6.7
INCD-Minho HPC and HTC cluster (Cirrus-B)
ISEC-Coimbra HPC cluster (Cirrus-C)