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2023

International articles with referee

  1. Teodoro, M. C., Conceição, E. M., Sinval, J., de Lourdes, M., & Neufeld, C. B. (2023). Adaptation, confirmatory factor analysis, and psychometric properties of the Brazilian version of the Repetitive Eating Questionnaire. International Journal of Eating Disorders. https://doi.org/10.1002/eat.23943
  2. Mixão, V., Pinto, M., Sobral, D. et al. ReporTree: a surveillance-oriented tool to strengthen the linkage between pathogen genetic clusters and epidemiological data. Genome Med 15, 43 (2023). https://doi.org/10.1186/s13073-023-01196-1
  3. João Dourado Santos, Daniel Sobral, Miguel Pinheiro et al. INSaFLU-TELEVIR: an open web-based bioinformatics suite for viral metagenomic detection and routine genomic surveillance, 07 November 2023, PREPRINT (Version 1) available at Research Square [https://doi.org/10.21203/rs.3.rs-3556988/v1]
  4. Carvalho J., Faria R., Butlin R.K., Sousa V.C. (2023) poolHelper: An R package to help in designing Pool-Seq studies. Methods in Ecology and Evolution. https://doi.org/10.1111/2041-210X.14185
  5. Carvalho J., Morales H., Faria R., Butlin R.K., Sousa V.C. (2023) Integrating Pool-seq uncertainties into demographic inference. Molecular Ecology Resources, https://doi.org/10.1111/1755-0998.13834
  6. Casanova, J., Sinval, J., & Almeida, L. (2024). Éxito académico, compromiso y autoeficacia de los estudiantes universitarios de primer año: variables personales y desempeño del primer semestre. Anales de Psicología / Annals of Psychology, 40(1), 44–53. https://doi.org/10.6018/analesps.479151
  7. F.J.A.L. Cruz and J.P.B. Mota, "Partial Denaturation of Double-Stranded DNA on Pristine Graphene under Physiological-like Conditions", Liquids 2023, 3, 168.
  8. F.J.A.L. Cruz and J.P.B. Mota, “Structure and Thermodynamics of Empty Clathrate Hydrates bellow the Freezing Point of H2O”, 14th Int. Chem. Bio. Eng. Conference, Bragança, Portugal, September 2023.
  9. Wang, S., Islam, H., Abdelwahab, H.S., Guedes Soares, C., 2024. Uncertainty analysis of CFD solver for predicting ship responses in head waves, in preparation.
  10. Gomes I., Galamba N., Protein Stability in a Natural Deep Eutectic Solvent: Preferential Hydration or Solvent Slaving?, J. Chem. Phys., 159, 235101, 2023 (URL: https://doi.org/10.1063/5.0177095)
  11. Neto V., Victor BL. , Galamba N., Cyclic Peptides as Aggregation Inhibitors for Sickle Cell Disease, J. Med. Chem., 66, 23, 16062–16074, 2023 (URL: https://doi.org/10.1021/acs.jmedchem.3c01484)
  12. Martins, G., Nascimento, C., Galamba, N., Mechanistic Insights into Polyphenols’ Aggregation Inhibition of α-Synuclein and Related Peptides, ACS, Chem. Neurosci., 14, 10, 1905–1920, 2023 (URL: https://doi.org/10.1021/acschemneuro.3c00162)
  13. Monteiro, H., Paiva, A., Duarte, R.C., Galamba, N., On the not so anomalous water-induced structural transformations of choline chloride–urea (reline) deep eutectic system, Physical Chemistry Chemical Physics 25 (1), 439-454, 2023 (URL: https://doi.org/10.1039/D2CP04139A)
  14. Dias, A. M. G. C., Moreira, I. P., Lychko, I., Soares, C. L., Nurrito, A., Barbosa, A. J. M., Lutz-Bueno, V., Mezzenga, R., Carvalho, A. L., Pina, A. S. & Roque, A. C. A. (2023). Hierarchical self-assembly of a reflectin-derived peptide. Front. Chem., 11.

Oral Presentations

  1. Mendes, Sofia L.; Sousa Santos, Carla; Feulner, Philine G. D.; Sousa, Vitor C. (2023) Contrasting outcomes of hybridization in Iberian chubs revealed through whole genome data. XIX ENBE Annual Meeting of the Portuguese Association for Evolutionary Biology, Lisboa Portugal
  2. Blanckaert, A; Sousa, VC (2023) Interactions between mechanisms of reproductive isolation. XIX ENBE Annual Meeting of the Portuguese Association for Evolutionary Biology, Lisboa Portugal
  3. Cecília Roque Conference Oral - Nature Inspired Solutions in Health Biotechnology 2023-12-09 Microbiotec 2023, 7th-9th December 2023, Covilhã, Portugal
  4. Arménio Barbosa Conference Oral - A Molecular Modeling Perspective on the development of Synthetic Affinity ligands 2023-12-09 Microbiotec 2023, 7th-9th December 2023, Covilhã, Portugal
  5. Cecília Roque Conference Oral - A scalable method to purify reflectins from inclusion bodies 2023-11-08 ISPPP 2023, 5th-8th November 2023, Viena, Austria
  6. Margaria Dias Conference Oral - Reflectin-derived protopeptide: solvent modulation to promote different supramolecular assembly and materials. 2023-06-07 Affinity 2023, 5th -7th June 2023, Lisbon, Portugal
  7. Iana Lychko Conference Oral - Characterization of dynamic self-assembly of reflectins 2023-06-07 Affinity 2023, 5th -7th June 2023, Lisbon, Portugal
  8. Gonçalo Teixeira Conference Oral - Odorant-binding proteins based sensors for Volatile Organic Compounds detection. 2023-06-07 Affinity 2023, 5th -7th June 2023, Lisbon, Portugal Young Investigator Award
  9. Carlos Costa Conference Oral - Portugal Affinity reagents towards SARS-CoV-2. 2023-06-07 Affinity 2023, 5th -7th June 2023, Lisbon, Portugal
  10. Cátia Soares Conference Oral - Portugal Dynamic Self-Assembly characterization of reflectins. 2023-06-02 Biophysics Festival, 1st-2nd June 2023, Porto, Portugal
  11. Arménio Barbosa Conference Oral - Multiscale Modeling in Biophysics: Navigating techniques for optimal application, Biophysics Festival 2023, 1st-2nd June 2023, Porto, Portugal
  12. Carvalho Leonardo, I., Alberti, A., Denoeud, F., Barreto Crespo, M. T., Capelo, J., & Bustos Gaspar, F. (2023). The complete plastome of Centaurium erythraea subsp. Majus (Hoffmanns. & Link) M.Laínz (Gentianaceae), the first chloroplast genome belonging to the Centaurium genus. Mitochondrial DNA Part B, 8(1), 86–90. https://doi.org/10.1080/23802359.2022.2160670
  13. Carvalho Leonardo, I., Alberti, A., Denoeud, F., Barreto Crespo, M. T., Capelo, J., & Bustos Gaspar, F. (2023). The complete plastome of Glandora prostrata subsp. Lusitanica (Samp.) D.C.Thomas (Boraginaceae), the first chloroplast genome belonging to the Glandora genus. Mitochondrial DNA Part B, 8(2), 270–273. https://doi.org/10.1080/23802359.2023.2175976

Proceeding in international conferences

  1. Title:
    • date:
    • Authors:

Posters (internation meetings)

  1. Sofia L. Mendes, Carla Sousa Santos, Philine G. D. Feulner, Vitor C. Sousa Multiple outcomes of hybridization in Iberian chubs inferred from whole genome data, 23-27 July 2023, Ferrara, Italy
  2. M. Furtado, I. Custódio, T. Pinheiro, R.C. da Silva, L.C. Alves, V. Corregidor, Artificial Neural Networks for high-resolution 3D imaging, ICNMTA 2022 Conference, September 11-16 (2022)
  3. V. Corregidor, L.C. Alves, T. Pinheiro, R.C. da Silva, M. Furtado, Artificial Neural Networks and Ion Beams for 3D Imaging, International Conference on Accelerators for Research and Sustainable Development, IAEA, May 23-27 (2022)
  4. Iana Lychko Conference Poster Optimized production of reflectins and characterization of their reversible self-assembly 2023-12-09 PROTEIOS Microbiotec 2023, 7th-9th December 2023, Covilhã, Portugal
  5. Arménio Barbosa Meeting Poster Modeling studies of reflectin de novo peptide assembly 2023-04-05 5th National Physical Chemistry Meeting (15ENQF) and 4th Computational Chemistry Symposium, 4-5th April, 2023, Portugal

Posters (national meetings)

Thesis / Dissertation

PhD Thesis

Finished

  1. Dr. Gonçalo Teixeira, “Olfaction inspired sensing using tailor-made proteins” , MIT Portugal Program of Bioengineering Systems, FCT NOVA, December 2023.

Ongoing

  1. Jorge Filipe Marques Gadelho
    • Título: Hydrodynamic Analysis of Oscillating Water Column Wave Energy Converters using OpenFOAM
    • Universidade: Instituto Superior Técnico - Universidade de Lisboa

Master Thesis

Finished

  1. RODRIGO DE JESUS EUSÉBIO "Re-implementation of a data analysis pipeline for the genetic characterization of viral pathogens in the context of laboratory surveillance of viral outbreaks" Sep, 2023 Nova Medical School
  2. Marta Ferreira (2023) Genomics of adaptation to cadmium on a spatially heterogeneous environment. MSc Biologia Evolutiva e do Desenvolvimento. Faculdade de Ciências da Universidade de Lisboa.
    • Mestrado em Bioinformática - Universidade do Minho;
      • Aluna: Catarina Gomes Ferreira;
      • Orientadores: Isabel Duarte (UAlg) e Miguel Rocha (UMinho).
      • MitoProfiles: Cancer mitochondrial profiles in high metabolic rate organs"

Ongoing

Patents

Datasets

Software Cientifico

  1. MitoCarta, depositado no GitHub (https://github.com/MitoProfiles/MitoCarta)
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