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2021

Journal Paper with direct contribution

  • MODELING THE IMPACTS OF HARBOR DREDGING AND DISPOSAL ON COASTAL WATER-LEVELS AND RUN-UP WITH XBEACH, Coastal Dynamics Conference, 28 June-2 July 2021.
  • Pereira, C., Maranha, J. R. e Cardoso R. (2021). A general mathematical framework for modelling soil-water retention behaviour. 3rd Pan-American Conference on Unsaturated Soils, Rio de Janeiro, Brazil (aceite para publicação).
  • CRAVO A., ROSA A., RODRIGUES M. (2020). Effects of climate change and anthropogenic pressures in the water quality of the Ria Formosa (Portugal). XX Seminário Ibérico de Química Marina - SIQUIMAR 2020, 1 pp.
  • Mendes, Lourenço S.; Lara, Javier L.; Viseu, Maria T. 2021. "Is the Volume-of-Fluid Method Coupled with a Sub-Grid Bubble Equation Efficient for Simulating Local and Continuum Aeration?" Water 13, no. 11: 1535.
  • Balduíno César Mateus,Mateus Mendes,José Torres Farinha nd António Marques Cardoso "Anticipating Future Behavior of an Industrial Press Using LSTM Networks" Appl. Sci. 2021, 11(13), 6101; https://doi.org/10.3390/app11136101
  • Paolillo, A., Sinval, J., Silva, S. A., & Scuderi, V. E. (2021). The relationship between inclusion climate and voice behaviors beyond social exchange obligation: The role of psychological needs satisfaction. Sustainability, 13(18), 1-19. https://doi.org/10.3390/su131810252
  • Balduino Mateus, Mateus Mendes, José Torres Farinha, António Marques Cardoso, Data Analysis for Predictive Maintenance Using Time Series and Deep Learning Models – A Case Study in a Pulp Paper Industry, in Proceedings of the TEPEN 2021 & IncoME-VI, Oct 20-23, 2021, Tianjin, China.
  • João Rodrigues, José Torres Farinha, António Marques Cardoso1 and Mateus Mendes, Prediction of Sensor Values in Paper Pulp Industry Using Neural Networks, Proceedings of the TEPEN 2021 & IncoME-VI, Oct 20-23, 2021, Tianjin, China.
  • Pais, P., Oliveira, J., Almeida, V., Yilmaz, M., Monteiro, P.T., Teixeira, M.C. “Transcriptome-wide differences between Saccharomyces cerevisiae and Saccharomyces cerevisiae var. boulardii: clues on host survival and probiotic activity based on promoter sequence variability”. Genomics, 113(2): 530-539, 2021.
  • Mendes S, et al. (2021) Genomic data and multi-species demographic modelling uncover past hybridization between currently allopatric freshwater species. HEREDITY https://doi.org/10.1038/s41437-021-00466-1.
  • Clemente F, et al. (2021) The genomic history of the Aegean palatial civilizations CELL 184: P2565-2586.e21 https://doi.org/10.1016/j.cell.2021.03.039
  • Palma JHN, 2017, CliPick – Climate change web picker. A tool bridging daily climate needs in process based modelling in forestry and agriculture, Forest Systems [S.l.], v. 26, n. 1, p. eRC01, may 2017. ISSN 2171-9845. https://doi.org/10.5424/fs/2017261-10251
  • SANTOS, M.L., D’AMBROSIO, M., RODRIGO, A.P., PAROLA, A.J. & COSTA, P.M. (2021). A transcriptomic approach to the metabolism of tetrapyrrolic photosensitizers in a marine annelid. Molecules 26, 3924. (doi: 10.3390/molecules26133924).
  • RODRIGO, A.P., GROSSO, A.R., BAPTISTA, P.V., FERNANDES, A.R., & COSTA, P.M. (2021). A transcriptomic approach to the recruitment of venom proteins in a marine annelid. Toxins 13, 97 (doi: 10.3390/toxins13020097).
  • RODRIGO, A.P., MENDES, V.M., MANADAS, B., GROSSO, A.R., ALVES DE MATOS, A.P., BAPTISTA, P.V., COSTA, P.M., FERNANDES, A.R. (2021). Specific antiproliferative properties of proteinaceous toxin secretions from the marine annelid Eulalia sp. onto ovarian cancer cells. Marine Drugs 19, 31 (doi: 10.3390/md19010031).

Journal Paper with indirect contribution (*)

Thesis / Dissertation

  • Manghnani, K. (2021) Extraction and Visualization of Fake News Indicators (Tese de mestrado) - Instituto Superior Técnico, Universidade de Lisboa. Lisboa, Portugal.
  • Mariana Luz, Projecto de mestrado com o titulo: "Assessing the Prevalence of Transcription Readthrough in healthy tissues through computational approaches", Mestrado em Genetica Molecular e Biomedicina, FCT-NOVA;
  • Valerio Fiori, Projecto de mestrado com o titulo: "Finding Biomarkers of Metastatic Potential in Colorectal Cancer", Mestrado em Bioinformatica e Biologia Computacional, FCUL

PhD Thesis

  • GONÇALVES, C. (2019-present). Coleoid venoms: Predicting cephalotoxin function and biotechnological applications from ecological and evolutionary traits. Ph.D. thesis, Faculdade de Ciências e Tecnologia da Universidade Nova de Lisboa, Monte de Caparica. Status: Ongoing. (January 2019). FCT grant ref. SFRH/BD/144914/2019

  • MARTINS, C. (2017-present). Carcinogenic toxicants and emerging pollutants. A comprehensive case-study on toxicant interactions in vivo and in vitro: from Molecular Toxicology to Environmental Risk Assessment. Ph.D. thesis, Faculdade de Ciências e Tecnologia da Universidade Nova de Lisboa, Monte de Caparica. Status: Ongoing. (September 2017). FCT grant ref. SFRH/BD/120030/2016

  • RODRIGO, A.P.C. (2021). The biotechnological value of a novel potent marine biotoxin from the polychaete worm Eulalia viridis: chemical and toxicological evaluation. Ph.D. thesis, Faculdade de Ciências e Tecnologia da Universidade Nova de Lisboa, Monte de Caparica, 246 pp. Status: Approved. Classification: N/A. FCT grant ref. SFRH/BD/109462/2015

Master Thesis

  • CABRAL, I. (2020-present). A computational approach to identify target receptors of marine toxins in the human proteome: Potential biotechnological applications. M.Sc. thesis, Faculdade de Ciências e Tecnologia da Universidade Nova de Lisboa, Monte de Caparica. Status: submitted.
  • SANTOS, M.L. (2021). A transcriptomic approach to the metabolism of porphyrin-like pigments in a marine Polychaeta (Eulalia sp.). M.Sc. thesis, Faculdade de Ciências e Tecnologia da Universidade Nova de Lisboa, Monte de Caparica. 43 pp. + Appendix. Final status: Approved. Classification: 18 (0-20).
  • GROU, M. (2021). A molecular and pathophysiological approach to tissue regeneration in the planarian model. M.Sc. thesis, Faculdade de Ciências e Tecnologia da Universidade Nova de Lisboa, Monte de Caparica, 40 pp. + Annexes. Final status: Approved. Classification: 19 (0-20).
  • PIMPÃO, A. (2021). Novel developments on the association of the AHR-CYP1A1 axis and arterial hypertension related to obstructive sleep apnea. M.Sc. thesis, Faculdade de Ciências e Tecnologia da Universidade Nova de Lisboa, Monte de Caparica (in collaboration with NOVA Medical School), Universidade Nova de Lisboa, Monte de Caparica, 77 pp. + Annexes. Final status: Approved. Classification: 19 (0-20).

Conference Paper

  • “Plantas ameaçadas de extinção - A Lista Vermelha da Flora Vascular de Portugal Continental”, por André Carapeto (Sociedade Portuguesa de Botânica), a 20 de Janeiro de 2021, integrada nas comemorações do Dia do Município de Vila do Bispo, organizada pela Sociedade Portuguesa de Botânica em parceria com a Câmara Municipal de Vila do Bispo.

  • “A flora ameaçada no Município de Leiria”, por André Carapeto (Sociedade Portuguesa de Botânica), a 25 de Fevereiro de 2021, organizada pela Sociedade Portuguesa de Botânica em parceria com a Câmara Municipal de Leiria e o Centro de Interpretação Ambiental de Leiria.

  • MOUTINHO CABRAL, I., MADEIRA, C., GROSSO, A.R., COSTA, P.M. (2021). A study on whole-transcriptomes of two Polychaeta for discovering novel bioproducts with potential biotechnological applications. International Conference for YOUNG Marine Researchers. The Bremen Society for Natural Sciences, Berlin (Germany), September 2021.

  • GONÇALVES, C., MOUTINHO CABRAL, I., RODRIGO, A.P., FONSECA,D., MADEIRA, C., GROSSO, A.R., COSTA, P.M. (2021). A stinging issue: omics and computational tools for the bioprospecting of novel marine toxins. XII European Conference on Marine Natural Products. National University of Ireland, Galway (Ireland), August 2021.

  • MOUTINHO CABRAL, I. (2021). A computational approach to identify target receptors of marine toxins in the human proteome: Potential biotechnological applications. Jornadas Intercalares das Dissertações Anuais dos Mestrados dos Departamentos de Química e Ciências da Vida 2021. NOVA School of Science and Technology, NOVA University of Lisbon, Monte de Caparica (Portugal), February 2021.

Conference Poster

  • RODRIGO, A.P., GROSSO, A., MENDES, V.M., MANADAS, B., BATISTA, P.V., FERNANDES, A.R., COSTA, P.M. (2021). Unveiling venomous annelids by combining omics with ecological traits: The example of a phyllodocid. 12th European Conference on Marine Natural Products, Galway (Ireland), September 2021.

  • MOUTINHO CABRAL, I., MADEIRA, C., GROSSO, A.R., COSTA, P.M. (2021). A study on whole-transcriptomes of two Polychaeta for discovering novel bioproducts with potential biotechnological applications. International Conference for YOUNG Marine Researchers. The Bremen Society for Natural Sciences, Berlin (Germany), September 2021.

Dataset

  • MOUTINHO CABRAL, I., MADEIRA, C., GROSSO, A.R., COSTA, P.M. Comparative transcriptomics between two potential toxin-secreting marine annelids: Glycera alba and Hediste diversicolor. GenBank OL606744-OL606747 (embargo pending)
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