2018 Journal Paper with direct contribution Llarena, Anna;Katrin, et al. "INNUENDO: a cross sectoral platform for the integration of genomics in the surveillance of food borne pathogens." EFSA Supporting Publications 15.11 (2018): 1498E. https://efsa.onlinelibrary.wiley.com/doi/abs/10.2903/sp.efsa.2018.EN-1498 Pina, F., Correia, J., Filipe, R., Araujo, F. and Cardroom, J., 2018, November. Nonintrusive Monitoring of Microservice-Based Systems. In 2018 IEEE 17th International Symposium on Network Computing and Applications (NCA) (pp. 1-8). IEEE. Correia J, Ribeiro F, Filipe R, Arauio F, Cardoso J. Response Time Characterization of Microservice-Based Systems. In 2018 IEEE 17th International Symposium on Network Computing and Applications (NCA) 2018 Nov 1 (pp. 1-5). IEEE. F.J.A.L. Cruz and J.P.B. Mota, “Equilibrium and Transport Distributions of DNA in Hydrophilic Nanopores”, 41st Iberian Adsorption Meeting, Gijón, Spain, September 2018. F.J.A.L. Cruz and J.P.B. Mota, “Thermodynamics and Kinetics of DNA in Hydrophilic Nanopores”, 11th International conference on Advanced Nanomaterials, Aveiro, Portugal, July 2018. F.J.A.L. Cruz and J.P.B. Mota, “Equilibrium and Transport Distributions of DNA in Hydrophilic Nanotubes”, XIII Physical-Chemistry National Meeting, Faro, Portugal, June 2018. Rodrigues, S., Sinval, J., Queirós, C., Marôco, J., & Kaiseler, M. (2019). Transitioning from recruit to officer: An investigation of how stress appraisal and coping influence work engagement. International Journal of Selection and Assessment, 27(2), 152–168. https://doi.org/10.1111/ijsa.12238 Sinval, J., Sirgy, M. J., Lee, D.-J., & Marôco, J. (2019). Quality of Work Life Scale: Validity evidence from Brazil, and Portugal. Applied Research in Quality of Life. https://doi.org/10.1007/s11482-019-09730-3 haplotype-resolved draft genome of the European sardine (Sardina pilchardus) B Louro, G De Moro, CM Garcia, C Cox, A Veríssimo, SJ Sabatino, ... 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International Journal of Selection and Assessment Sinval, J., Sirgy, M. J., Lee, D.-J., & Marôco, J. (2019) International Journal of Selection and Assessment, 27(2), 152–168. Quality of Work Life Scale: Validity evidence from Brazil, and Portugal Sinval, J., Sirgy, M. J., Lee, D.-J., & Marôco, J. (2019) Applied Research in Quality of Life A haplotype-resolved draft genome of the European sardine (Sardina pilchardus) B Louro, G De Moro, CM Garcia, C Cox, A Veríssimo, SJ Sabatino, .. BioRxiv, 441774 Nuclear protein phylogenies support the monophyly of the three bryophyte groups (Bryophyta Schimp.) 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Gomes, et al, J Grid Computing (2018) 16: 381. https://doi.org/10.1007/s10723-018-9453-3 Enabling rootless Linux Containers in multi-user environments: the udocker tool, Jorge Gomes, Isabel Campos, Emanuele Bagnaschi, Mario David, Luis Alves, Joao Martins, Joao Pina, Alvaro Lopez-Garcia, Pablo Orviz, Computer Physics Communications, Volume 232, 2018, Pages 84-97, ISSN 0010-4655, DOI: 10.1016/j.cpc.2018.05.021 Running high resolution coastal models in forecast systems: moving from workstations and HPC cluster to cloud resources, João Rogeiro, Marta Rodrigues, Alberto Azevedo, Anabela Oliveira, João Paulo Martins, Mário David, João Pina, Nuno Dias, Jorge Gomes, Advances in Engineering Software, Volume 117, 2018, Pages 70-79, ISSN 0965-9978, DOI: 10.1016/j.advengsoft.2017.04.002 Electrons in GEO measured with the ESA Multi-Functional Spectrometer during the January 2014 SEP, L. Arruda, P. Goncalves, A. Marques, J. Costa-Pinto, A. Aguilar, P. Marinho, T. Sousa, H. Evans, P. Nieminen, IEEE TNS Vol65, Issue 8 pp 1540 - 1545 August 18, DOI: 10.1109/TNS.2018.2854161 Assessment of radiation exposure in manned missions to Mars for three mission profiles, A. L. Casimiro, J. M. Sampaio, P. Gonçalves, M. Pinto, Radiation and Applications Journal (RAD Journal), Volume 3, Issue 1, pp. 27-33, March 2018, DOI: 10.21175/RadJ.2018.01.006 Optimization of the signal-to-background ratio in prompt gamma imaging using energy- and shifting time-of-flight discrimination: experiments with a scanning parallel-slit collimator, P. Cambraia Lopes, P. Crespo, J. Huizenga, D.R. Schaart, IEEE Trans. Radiat. Plasma Med. Sci., vol. 2, pp. 510-9, DOI: 10.1109/TRPMS.2018.2846612 Fast phylogenetic inference from typing data, by J. A. Carriço, M. Crochemore, A. P. Francisco, S. P. Pissis, B. Ribeiro‑Gonçalves and C. Vaz. Algorithms for Molecular Biology, 13:4, 2018, DOI: 10.1186/s13015-017-0119-7 Dynamic phylogenetic inference for sequence-based typing data, by A. P. Francisco, M. 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D 98 (2018) 112010 Thesis / Dissertation PhD Thesis Novel Techniques for High Pressure Noble Gas Radiation Detectors link Demonstração de um dispositivo de imagiologia por raios ortogonais para apoio à radioterapia externa de fotões [ link ]NA An Emulation Workbench for Position Sensitive Gaseous Scintillation Detectors [ link ]NA Development of new high-performance Positron Emission Mammography based on new photosensor technology [ link ]NA Master Thesis Average lateral distribution function of muons in 10^{17} eV extensive air showers link Measurement of rare top quark decays in ATLAS/LHC link Análise da deterioração das características de um protótipo de CdTe para um Telescópio Espacial de Raios Gama em ambiente de radiação orbital link Effects of Confinement in the Folding of Knotted Proteins link Studying Elements of Genetic Programming for Multiclass Classification link Conference Paper Control System For ATLAS TileCal HVRemote Boards F. Martins, L. Gurriana, L. Seabra, G. 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Nae on behalf of the SNO+ Collaboration published in Proceedings of student poster session of the VII International Pontecorvo Neutrino Physics School (Prague, Czech Republic, August 20 - September 1, 2017), edited by F. Simkovic, - Dubna: JINR, ISBN 978-5-9530-0484-8 Optical Calibration of the SNO+ Detector A.S. Inácio on behalf of the SNO+ Collaboration published in Proceedings of student poster session of the VII International Pontecorvo Neutrino Physics School (Prague, Czech Republic, August 20 - September 1, 2017), edited by F. Simkovic, - Dubna: JINR, ISBN 978-5-9530-0484-8 SNO J. Maneira (on behalf of the SNO Collaboration) Proceedings of the XVII International Workshop on Neutrino Telescopes. March 2017, Venice, Italy Calibration of the SNO+ Detector with a Light Diffusing Source in the Water Phase A. S. Inácio et. al. on behalf of the SNO+ Collaboration Proceedings of the XXVIII International Conference on Neutrino Physics and Astrophysics AmBe source calibration in the SNO+ water phase Y. Liu on behalf of the SNO+ Collaboration Proceedings of the XXVIII International Conference on Neutrino Physics and Astrophysics From SNO to SNO+ and the search for neutrino masses J. Maneira on behalf of the SNO+ Collaboration Published in Livro de Atas da 20.ª Conferência Nacional de Física e 26.º Encontro Ibérico para o Ensino da Física, FÍSICA 2016. Reactor neutrino oscillations with the SNO+ detector Stefan Nae on behalf of the SNO+ Collaboration Published in Livro de Atas da 20.ª Conferência Nacional de Física e 26.º Encontro Ibérico para o Ensino da Física, FÍSICA 2016. Measuring oscillations with different neutrino sources S. Andringa Published in Livro de Atas da 20.ª Conferência Nacional de Física e 26.º Encontro Ibérico para o Ensino da Física, FÍSICA 2016. OPENCoastS.pt – Serviço de previsão em tempo real a pedido para a circulação na ZEE portuguesa A. Azevedo, A.B. Fortunato, J. Teixeira, J. Rogeiro, A. Oliveira, M. Rodrigues, J. Gomes, M. David e J. Pina (2018) Atas das 5as Jornadas de Engenharia Hidrográfica, I.H. (eds), 105-108. Generation of operational forecasts on demand: the OPENCoastS platform A.B. Fortunato, A. Oliveira, J. Rogeiro, J. Teixeira, A. Azevedo, J. Gomes, M. David, J. Pina 17thIMUM Book of Abstracts Digital preservation challenges and methodology using Cloud resources - the OPENCoastS case study João Rico, José Barateiro, António Silva, João Rogeiro, Alberto Azevedo, Anabela Oliveira Previsão em tempo real a pedido na costa portuguesa - O serviço opencoasts.pt e sua demonstração na circulação da Ria Formosa Teixeira, J., Fortunato, A. B., Rogeiro, J., Azevedo, A., Rodrigues, M., Oliveira, A. (2018) Atas do 14º Congresso da água -Gestão dos Recursos Hidricos:Novos Desafios, 16 pp. High-performance computing applied to numerical models in UBEST. Martins, R., Rogeiro, J., Rodrigues, M., Fortunato, A.B., Oliveira, A., Azevedo, A. (2018) Scientific Challenges & Business Opportunities in Water Management (SciBOWater). The SNO+ Experiment, V. Lozza on behalf of the SNO+ Collaboration, Proceedings of the 5th International Solar Neutrino Conference, June 2018, Dresden, Germany Using Spark and GraphX to parallelize large-scale simulations of bacterial populations over host contact networks, by A. S. Teixeira, P. T. Monteiro, J. A. Carriço, F. C. Santos and A. P. Francisco. In Algorithms and Architectures for Parallel Processing: 17th International Conference, ICA3PP 2017, 591-600, 2017, DOI: 10.1007/978-3-319-65482-9_44 Gomes J., Christensen A.L. (2018) Task-Agnostic Evolution of Diverse Repertoires of Swarm Behaviours. In: Dorigo M., Birattari M., Blum C., Christensen A., Reina A., Trianni V. (eds) Swarm Intelligence. ANTS 2018. Lecture Notes in Computer Science, vol 11172. Springer, Cham, doi: 10.1007/978-3-030-00533-7_18 J. Gomes and A. L. Christensen, "Comparing Approaches for Evolving High-Level Robot Control Based on Behaviour Repertoires," 2018 IEEE Congress on Evolutionary Computation (CEC), Rio de Janeiro, 2018, pp. 1-6. doi: 10.1109/CEC.2018.8477699 Conference Poster Average shape of longitudinal shower profiles measured at the Pierre Auger Observatory, Sofia Andringa, UHECR 2018, Ecole Supérieure de Chimie, Paris, France Calibration of the SNO+ Detector with a Light Diffusing Source in the Water Phase, A. S. Inácio et. al. on behalf of the SNO+ Collaboration, Neutrino 2018 - XXVIII International Conference on Neutrino Physics and Astrophysics, Heidelberg, Germany Development of a Directionality Detector for RADEM, the Radiation Hard Electron Monitor aboard the JUICE Mission, Marco Alves Pinto, RADECS 2018, Gotemburg, Sweden Precision Measurement of the Monthly Cosmic Ray Fluxes with the Alpha Magnetic Spectrometer on the ISS, Miguel Orcinha (on behalf of the AMS collaboration), 26th Extended European Cosmic Ray Symposium and 35th Russian Cosmic Ray Conference, Barnaul - Belokurikha - Altai Mountains, Russia Recent developments in deep-learning applied to open HEP data, Giles Strong, Advanced Statistics for Physics Discovery, Padova University, italy Search for flavour-changing neutral currents tZ interactions in proton-proton collisions at sqrt(s) = 13 TeV collected with the ATLAS detector, Ana Peixoto, 11th International Workshop on Top Quark Physics, Bad Neuenahr, Germany Search for new interaction at the top quark section, Ana Peixoto, 1st IGFAE/LIP Workshop, Braga, Portugal Search for vector-like quarks decaying to a Z boson with the ATLAS experiment, Tiago Vale, 11th International Workshop on Top Quark Physics, Bad Neuenahr, Germany Triggering on hadronic signatures in the ATLAS experiment - Developments for 2017 and 2018, Emanuel Gouveia, 23rd International Conference on Computing in High Energy and Nuclear Physics, Sofia - Bulgaria Development of a framework for Multi-Messenger Observations with the Auger Observatory, Sofia Andringa, Lorenzo Cazon, Bernardo Dias, Nelson Eiró, XXVIII Encontro Nacional de Astronomia e Astrofísica, Observatório Geofísico e Astronómico da Universidade de Coimbra Search for heavy fermions with the ATLAS experiment, Tiago Vale, 4th IDPASC Workshop, Coimbra, Portugal Search for tZ production via Flavour Changing Neutral Currents with the ATLAS Experiment at 13 TeV, Ana Peixoto, 4th IDPASC Workshop, Coimbra, Portugal